Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007763.1 Corchorus capsularis cultivar CVL-1 contig07784, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31466

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
536--572
10
3.7
10
100
0
74
35
21
10
32
1.88
2729--2768
21
1.9
21
85
10
55
25
0
12
62
1.30
7473--7506
11
3.1
11
82
0
50
0
8
20
70
1.13
7815--7853
14
2.7
14
88
4
51
58
7
2
30
1.39
9063--9098
19
1.9
18
88
5
54
41
2
22
33
1.68
12366--12499
69
2.0
68
92
1
223
29
23
11
35
1.91
17191--17253
31
2.0
31
90
0
99
41
4
22
31
1.74
17347--17375
6
4.8
6
100
0
58
65
0
0
34
0.93

Tables:   1

The End!