Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007764.1 Corchorus capsularis cultivar CVL-1 contig07785, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63783

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1438
332
4.3
333
86
3
1923
32
14
16
36
1.89
12270--12343
29
2.5
29
82
2
94
17
31
16
35
1.92
12478--12547
29
2.4
30
83
7
90
38
14
28
18
1.90
54982--55047
2
34.5
2
85
8
93
54
0
0
45
0.99
54984--55047
30
2.2
29
97
2
119
54
0
0
45
0.99
59807--59851
22
2.0
22
100
0
90
17
17
22
42
1.89

Tables:   1

The End!