Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007765.1 Corchorus capsularis cultivar CVL-1 contig07786, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17594

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5328--5358
2
15.5
2
100
0
62
51
0
0
48
1.00
10392--10431
14
2.9
14
84
0
53
75
5
2
17
1.10
10640--10664
13
1.9
13
100
0
50
16
12
0
72
1.13
12022--12058
15
2.5
15
100
0
74
24
0
40
35
1.55
12022--12058
7
4.9
8
87
12
60
24
0
40
35
1.55
13086--13110
6
4.2
6
100
0
50
48
0
16
36
1.46

Tables:   1

The End!