Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007766.1 Corchorus capsularis cultivar CVL-1 contig07787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43653

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3357--3417
32
2.0
31
84
9
81
67
16
1
14
1.32
7676--7700
13
1.9
13
100
0
50
56
4
0
40
1.18
8357--8388
2
16.0
2
100
0
64
50
0
0
50
1.00
12648--12720
36
2.0
37
81
7
87
52
17
6
23
1.69
19232--19262
2
15.5
2
100
0
62
48
0
0
51
1.00
34389--34425
18
2.1
18
100
0
74
51
27
5
16
1.66
35342--35399
29
2.0
28
87
9
82
29
27
29
13
1.94
36504--36577
38
1.9
38
100
0
148
29
21
8
40
1.82
37001--37061
26
2.3
26
86
5
79
39
6
19
34
1.78
39708--39742
18
2.0
18
88
5
54
2
8
5
82
0.91

Tables:   1

The End!