Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007767.1 Corchorus capsularis cultivar CVL-1 contig07788, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34201

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20964--21031
31
2.1
33
84
10
88
29
23
11
35
1.90
21041--21167
60
2.1
59
82
7
150
29
11
24
34
1.90
31945--32712
31
26.0
31
86
8
1031
22
12
17
47
1.81
31945--32712
58
13.0
59
86
7
968
22
12
17
47
1.81
31959--32712
89
8.6
89
86
8
1000
22
12
17
47
1.81
32718--32813
22
4.4
22
82
2
104
19
20
23
35
1.96
33256--33961
332
2.1
332
93
2
1213
30
16
18
35
1.93
33256--34125
332
2.6
331
86
4
1069
31
15
17
35
1.92

Tables:   1

The End!