Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007779.1 Corchorus capsularis cultivar CVL-1 contig07800, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61469

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
314--1973
335
4.9
333
83
4
1829
33
14
15
36
1.88
314--1975
668
2.5
662
82
5
1883
33
14
15
36
1.88
1995--2095
50
2.0
50
100
0
202
33
7
18
39
1.80
2411--2440
15
2.0
15
100
0
60
33
20
20
26
1.97
6449--6489
21
2.0
21
85
9
57
12
53
14
19
1.72
16510--16536
2
13.5
2
100
0
54
51
0
48
0
1.00
19831--19891
30
2.1
30
84
3
79
47
21
8
22
1.77
21839--21872
6
5.7
6
89
0
50
79
2
14
2
0.97
25977--26004
9
3.1
9
100
0
56
89
0
10
0
0.49
26347--26379
5
6.6
5
96
0
57
0
15
3
81
0.80
33802--33834
12
2.6
13
85
9
50
69
18
0
12
1.18
44343--44375
13
2.4
14
90
5
50
60
0
39
0
0.97
44432--44467
18
2.0
18
100
0
72
44
11
11
33
1.75
56952--56983
17
1.9
16
93
6
55
68
0
31
0
0.90

Tables:   1

The End!