Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007780.1 Corchorus capsularis cultivar CVL-1 contig07801, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58023

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5413--5462
25
1.9
27
92
8
86
30
12
14
44
1.81
7139--7164
3
8.7
3
100
0
52
0
34
0
65
0.93
38953--38977
2
12.5
2
100
0
50
0
52
0
48
1.00
41984--42019
3
12.0
3
100
0
72
66
0
0
33
0.92
47031--47069
1
39.0
1
100
0
78
100
0
0
0
0.00
51335--51363
7
4.1
7
100
0
58
13
27
31
27
1.94

Tables:   1

The End!