Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007800.1 Corchorus capsularis cultivar CVL-1 contig07821, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30019

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5959--6021
19
3.4
19
72
16
69
15
17
9
57
1.65
5943--6029
36
2.5
36
88
3
133
16
19
9
55
1.67
6103--6194
29
3.2
29
74
0
103
25
3
25
46
1.67
7007--7219
32
6.7
32
82
0
255
41
23
16
18
1.90
7017--7217
64
3.1
64
91
0
312
43
23
15
16
1.87
8473--8512
21
1.9
21
94
0
71
30
10
22
37
1.87
12083--12115
10
3.3
10
100
0
66
0
18
63
18
1.31
13223--13251
13
2.1
14
93
6
51
20
20
10
48
1.79
13338--13362
13
1.9
13
100
0
50
48
8
4
40
1.51
25892--25949
29
2.0
29
96
0
107
15
13
32
37
1.87

Tables:   1

The End!