Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007814.1 Corchorus capsularis cultivar CVL-1 contig07835, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6980

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4859--4961
47
2.2
48
83
1
127
8
23
34
33
1.85
4859--4961
16
6.5
16
76
6
102
8
23
34
33
1.85
5186--5270
42
2.0
42
90
0
134
36
3
17
42
1.67
5700--5802
16
6.5
16
76
2
91
11
13
34
39
1.81
5700--5802
47
2.2
48
87
1
145
11
13
34
39
1.81
5732--5818
32
2.7
32
80
3
86
9
17
36
36
1.82
6026--6107
42
2.0
42
95
0
146
36
4
19
39
1.73
6626--6697
16
4.5
15
78
14
74
6
19
40
33
1.78
6612--6697
32
2.7
32
85
0
118
8
19
39
32
1.81

Tables:   1

The End!