Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007816.1 Corchorus capsularis cultivar CVL-1 contig07837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15159

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1079--1271
41
4.7
41
81
7
223
34
17
15
32
1.91
1075--1271
82
2.4
80
85
9
247
34
17
15
32
1.91
4771--4815
21
2.1
21
100
0
90
20
28
13
37
1.90
7886--7948
28
2.2
29
80
8
76
46
28
7
17
1.76
7841--8099
75
3.4
75
90
2
403
42
27
12
16
1.84
7961--8108
28
5.6
28
68
18
84
45
25
10
18
1.82
8042--8135
27
3.4
28
84
5
95
48
25
7
18
1.73
8085--8156
27
2.7
27
97
0
135
50
31
4
13
1.61
13526--13632
46
2.3
47
79
9
121
41
17
22
18
1.91
13978--14193
115
1.9
117
94
1
382
27
21
27
23
1.99
13750--14091
68
5.0
68
86
2
461
26
19
29
25
1.98
14093--14308
70
3.1
70
84
6
269
28
18
26
25
1.98
14789--14870
41
2.0
41
87
0
119
34
17
15
32
1.91

Tables:   1

The End!