Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007820.1 Corchorus capsularis cultivar CVL-1 contig07841, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16223

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10477--10511
12
2.8
12
95
4
61
25
20
17
37
1.94
10493--10524
17
1.9
16
93
6
55
31
18
12
37
1.88
12002--12071
34
2.1
34
97
0
131
47
15
2
34
1.61
12222--12294
30
2.5
30
93
2
121
39
9
2
47
1.50
12819--12982
90
1.8
90
82
5
215
37
6
15
40
1.73
12604--14247
549
3.0
546
92
3
2651
38
14
9
36
1.80
13996--14033
17
2.2
19
86
13
55
39
7
7
44
1.63
13942--14105
90
1.8
90
86
5
242
38
5
15
40
1.70
13150--14245
574
1.9
577
95
0
1964
38
14
9
36
1.79
15188--15462
141
1.9
142
83
3
349
38
16
14
29
1.89

Tables:   1

The End!