Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007832.1 Corchorus capsularis cultivar CVL-1 contig07853, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6823

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3278--3327
22
2.3
22
75
6
57
68
14
10
8
1.40
4650--5076
48
8.9
48
87
1
561
21
28
17
32
1.96
4639--5116
48
9.9
49
84
4
521
21
28
17
32
1.96
6108--6219
23
4.9
23
64
17
63
33
9
9
47
1.70
6148--6204
23
2.4
23
85
2
69
35
7
10
47
1.65
6164--6220
24
2.4
23
80
5
69
45
7
12
35
1.69

Tables:   1

The End!