Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007834.1 Corchorus capsularis cultivar CVL-1 contig07855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34341

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5972--6010
20
1.9
21
89
5
62
28
38
25
7
1.83
12629--12731
33
3.1
33
77
5
109
27
9
18
44
1.81
13174--13236
30
2.1
30
85
5
83
31
15
33
19
1.93
21251--21275
6
4.2
6
100
0
50
16
20
48
16
1.82
21808--21846
19
2.1
19
85
0
51
61
0
5
33
1.18
23387--23462
37
2.1
37
89
0
116
22
11
9
56
1.63
24821--24849
10
3.0
10
95
5
51
20
37
10
31
1.86

Tables:   1

The End!