Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007837.1 Corchorus capsularis cultivar CVL-1 contig07858, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8801

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--50
2
16.0
2
100
0
64
50
0
0
50
1.00
738--798
15
4.0
15
74
4
50
52
1
0
45
1.10
755--799
18
2.3
20
77
14
58
48
0
0
51
1.00
2876--2907
3
10.7
3
100
0
64
0
31
0
68
0.90
3722--3746
1
25.0
1
100
0
50
100
0
0
0
0.00
4197--4293
42
2.3
40
84
8
115
39
8
8
44
1.64
7233--7297
11
5.8
11
75
18
55
81
13
4
0
0.84
7224--7287
33
1.9
34
90
3
103
79
17
3
0
0.85
7308--7384
39
2.0
40
94
2
138
41
25
9
23
1.84
7390--7475
35
2.5
35
94
0
154
22
31
15
31
1.94
7460--7569
29
3.7
29
85
3
121
35
22
14
27
1.93
7660--7863
95
2.2
89
81
10
245
28
23
13
34
1.93

Tables:   1

The End!