Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007840.1 Corchorus capsularis cultivar CVL-1 contig07861, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13348

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1192--1256
10
6.4
10
84
15
73
61
7
23
7
1.49
1193--1322
11
11.7
11
73
16
92
60
8
20
10
1.54
1202--1239
18
2.1
18
90
9
60
65
5
23
5
1.34
1192--1250
30
2.1
27
87
9
82
62
6
23
6
1.44
1219--1322
24
4.4
24
84
2
131
58
8
22
10
1.58
1326--1493
36
4.7
36
86
2
214
43
9
21
25
1.83
1522--1629
32
3.2
33
80
15
141
48
6
17
27
1.72
1532--1650
36
3.4
35
80
13
147
47
8
17
26
1.76
1522--1650
68
1.9
68
85
9
183
48
7
17
27
1.74
6725--6771
10
4.7
10
78
19
53
6
38
2
53
1.39
6725--6782
30
1.9
30
92
0
98
6
36
3
53
1.45
7410--7451
22
2.0
21
86
13
59
19
9
19
52
1.72
7895--7929
2
17.5
2
100
0
70
51
0
0
48
1.00
9845--9884
21
1.9
21
85
10
55
52
20
17
10
1.72

Tables:   1

The End!