Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007842.1 Corchorus capsularis cultivar CVL-1 contig07863, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50073

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1259--1316
29
2.0
28
90
3
89
36
8
13
41
1.76
3924--3961
20
1.9
20
100
0
76
78
10
0
10
0.95
5343--5391
21
2.3
21
96
0
89
53
14
4
28
1.59
14409--14447
2
19.5
2
89
10
62
48
0
2
48
1.15
14818--14965
74
2.0
74
93
1
253
37
5
13
43
1.67
40995--41020
1
26.0
1
100
0
52
100
0
0
0
0.00

Tables:   1

The End!