Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007846.1 Corchorus capsularis cultivar CVL-1 contig07867, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17428

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5427--5469
21
2.0
21
82
8
52
53
9
2
34
1.46
5156--5552
197
2.0
196
87
5
566
46
16
7
29
1.74
5609--5701
25
4.0
24
70
17
79
45
24
13
16
1.84
5732--5794
31
2.0
32
81
3
74
30
25
14
30
1.95
5924--5962
2
20.5
2
89
10
64
51
0
0
48
1.00
6781--6856
32
2.4
32
81
0
80
51
13
10
25
1.72
9793--9838
22
2.1
22
100
0
92
58
10
13
17
1.62

Tables:   1

The End!