Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007849.1 Corchorus capsularis cultivar CVL-1 contig07870, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29363

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2261--2290
2
15.0
2
100
0
60
50
0
0
50
1.00
5557--5618
29
2.1
29
84
6
79
32
4
9
53
1.55
6100--6149
23
2.2
23
100
0
100
48
28
12
12
1.76
15977--16006
14
2.1
14
100
0
60
20
13
6
60
1.55
16342--16372
12
2.7
12
95
5
55
29
9
9
51
1.66
17574--17602
14
2.1
14
100
0
58
31
6
13
48
1.69
18942--18967
6
4.3
6
100
0
52
53
15
30
0
1.42
24093--24138
16
2.8
17
83
3
58
54
0
36
8
1.32
25315--25400
42
2.0
42
86
4
120
16
9
17
56
1.65
25936--26017
35
2.3
35
91
0
128
36
15
6
41
1.72
26000--26107
17
6.1
17
73
14
85
36
18
4
40
1.71
26025--26166
35
4.0
35
75
8
142
37
18
7
36
1.80
26043--26088
21
2.2
21
92
0
74
43
17
2
36
1.61
25999--26140
73
1.9
73
94
0
248
36
18
6
38
1.76

Tables:   1

The End!