Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007852.1 Corchorus capsularis cultivar CVL-1 contig07873, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3878

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
106--142
2
19.0
2
94
5
67
51
0
0
48
1.00
660--691
16
2.0
16
100
0
64
50
12
6
31
1.65
722--780
31
1.9
31
92
0
100
37
11
11
38
1.79
1833--1865
12
2.6
13
90
4
50
21
3
0
75
0.93
3447--3482
17
2.1
17
100
0
72
41
0
16
41
1.48

Tables:   1

The End!