Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007855.1 Corchorus capsularis cultivar CVL-1 contig07876, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4821

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
197--234
4
9.8
4
82
5
51
78
0
0
21
0.74
195--241
21
2.2
21
81
11
51
80
0
0
19
0.70
193--236
8
5.6
8
83
5
54
81
0
0
18
0.68
193--238
16
2.9
16
81
12
60
80
0
0
19
0.71
193--241
23
2.2
23
76
20
50
81
0
0
18
0.69
310--396
14
5.9
14
75
16
77
39
6
11
42
1.68
1062--1093
16
2.0
16
93
0
55
71
0
9
18
1.12
1874--1928
23
2.4
23
96
0
101
27
20
12
40
1.88
2123--2220
24
4.0
24
77
5
90
25
24
4
45
1.70
2122--2211
8
11.2
8
73
11
69
24
24
3
47
1.67
2314--2499
22
8.5
22
74
10
150
29
19
5
44
1.74
2391--2454
14
4.4
14
69
21
51
32
18
3
45
1.65

Tables:   1

The End!