Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007857.1 Corchorus capsularis cultivar CVL-1 contig07878, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8518

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6022--6237
120
1.8
120
91
0
360
36
20
11
31
1.88
6613--6663
26
2.0
26
100
0
102
52
7
23
15
1.68
6613--6673
26
2.5
24
92
7
97
49
9
24
16
1.76
6918--6950
15
2.1
16
88
11
50
57
0
6
36
1.23
7130--7215
42
2.1
41
84
6
111
51
9
4
34
1.55

Tables:   1

The End!