Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007865.1 Corchorus capsularis cultivar CVL-1 contig07886, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16930

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1785--1868
42
2.0
42
100
0
168
33
11
14
40
1.82
4309--4374
34
1.9
34
93
0
114
42
19
21
16
1.89
12181--12304
33
3.7
33
79
8
135
23
41
28
7
1.81
13314--13348
5
7.0
5
87
12
54
80
0
0
20
0.72
14700--14809
33
3.3
33
78
5
132
33
11
17
37
1.86
14699--14822
66
1.9
66
93
0
212
30
11
19
38
1.87
14698--14835
66
2.1
66
87
0
204
30
10
19
39
1.86
14833--14946
33
3.6
31
84
5
122
32
11
16
39
1.84
16774--16897
33
3.7
33
78
8
126
23
40
28
8
1.83

Tables:   1

The End!