Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007866.1 Corchorus capsularis cultivar CVL-1 contig07887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23314

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47--170
33
3.7
33
81
10
137
24
41
25
8
1.84
9061--9155
24
4.0
24
71
8
77
53
10
28
7
1.62
11602--12274
334
2.0
334
100
0
1346
36
17
11
34
1.86
22308--22357
18
2.7
18
79
14
66
38
10
0
52
1.35
22315--22349
6
5.8
6
96
0
61
37
11
0
51
1.38
22699--22748
21
2.6
19
79
20
52
44
0
8
48
1.32

Tables:   1

The End!