Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007869.1 Corchorus capsularis cultivar CVL-1 contig07890, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22606

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1248--1292
22
2.2
21
81
14
58
31
6
2
60
1.35
2136--2308
85
2.0
84
86
4
240
38
8
2
49
1.48
5240--5371
66
2.0
65
94
2
230
35
18
16
29
1.93
7337--7405
29
2.4
29
87
0
93
40
28
10
20
1.85
9692--9732
22
1.9
21
85
5
55
31
12
0
56
1.36
16455--17468
199
5.1
199
85
1
1345
34
18
13
33
1.90
16429--17465
395
2.6
396
86
2
1366
34
18
13
33
1.90
17830--18191
199
1.8
200
90
0
582
37
17
12
32
1.87
18358--18411
26
2.1
26
100
0
108
40
3
22
33
1.71
18362--18417
26
2.2
26
93
0
94
35
7
23
33
1.82
22499--22540
22
1.9
22
95
0
75
23
30
14
30
1.94

Tables:   1

The End!