Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007871.1 Corchorus capsularis cultivar CVL-1 contig07892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5752

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1667--1806
63
2.2
63
84
5
176
12
11
37
38
1.79
1699--1806
32
3.4
32
88
2
173
13
9
36
40
1.77
1714--1799
15
5.5
15
82
8
100
17
8
32
41
1.79
1954--2043
16
5.6
16
82
0
108
4
11
32
52
1.57
1954--2065
32
3.5
32
86
2
154
6
10
31
51
1.61
1967--2059
16
5.8
16
80
2
107
5
9
31
53
1.56
2129--2158
15
1.9
16
93
6
53
0
13
40
46
1.43

Tables:   1

The End!