Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007875.1 Corchorus capsularis cultivar CVL-1 contig07896, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42284

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4032--4067
19
1.9
18
88
5
54
33
22
2
41
1.68
10244--10278
18
1.9
18
94
0
61
20
11
37
31
1.88
11369--11816
167
2.7
164
81
6
513
30
14
14
40
1.86
11975--12009
17
2.0
18
94
5
63
40
0
11
48
1.39
15008--15110
53
1.9
53
84
0
134
17
19
25
37
1.93
22168--22225
29
2.0
30
83
10
75
48
0
6
44
1.29
41807--41848
21
2.0
21
90
9
68
52
2
14
30
1.54
42011--42056
2
23.0
2
95
0
83
47
0
0
52
1.00

Tables:   1

The End!