Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007895.1 Corchorus capsularis cultivar CVL-1 contig07916, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9949

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1337--1820
167
2.9
166
83
5
636
38
16
15
29
1.90
7889--8383
22
22.7
22
66
16
122
36
12
9
41
1.77
8465--8614
22
6.8
22
70
15
96
35
14
9
41
1.77
8524--8633
44
2.5
44
82
7
118
35
16
9
39
1.80
8462--8614
66
2.3
66
82
6
177
35
15
9
40
1.79
8530--8634
22
4.8
23
79
5
103
36
13
9
40
1.77
8910--8970
31
2.0
31
90
6
97
47
3
16
32
1.63
8914--8983
31
2.2
31
82
7
79
51
4
14
30
1.61

Tables:   1

The End!