Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007896.1 Corchorus capsularis cultivar CVL-1 contig07917, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11450

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1784--2088
102
3.0
101
86
3
398
34
11
18
35
1.87
2853--2882
2
15.0
2
100
0
60
50
0
0
50
1.00
4668--4705
15
2.5
15
84
12
51
47
5
0
47
1.24
4663--4707
18
2.5
18
82
7
56
51
4
0
44
1.21
5027--5302
90
3.1
89
88
4
403
44
5
11
38
1.64
5317--5353
2
18.5
2
100
0
74
51
0
0
48
1.00
6931--6981
25
2.0
25
96
0
93
49
25
17
7
1.74
9466--9491
13
2.0
13
100
0
52
23
0
30
46
1.53
10713--10774
25
2.3
26
83
8
72
22
17
6
53
1.67
10856--11005
7
20.4
7
69
16
65
18
24
2
54
1.56
10842--10974
36
3.6
36
90
3
203
17
23
3
56
1.55
10926--10994
22
3.1
21
78
15
77
18
20
2
57
1.52
11016--11079
16
4.1
16
70
11
60
15
20
6
57
1.59

Tables:   1

The End!