Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007900.1 Corchorus capsularis cultivar CVL-1 contig07921, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18818

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
779--834
21
2.6
22
75
11
62
7
23
51
17
1.70
4065--4120
24
2.4
24
79
5
71
25
14
5
55
1.60
5759--5792
11
3.2
10
84
15
50
50
17
2
29
1.61
6722--6764
13
3.4
13
83
6
61
76
11
6
4
1.13
8180--8396
108
2.0
108
98
0
416
22
18
21
37
1.94
10569--10604
19
1.9
18
88
5
54
33
22
2
41
1.68
10854--10884
2
15.0
2
93
6
53
48
0
3
48
1.17
18459--18491
6
5.5
6
100
0
66
54
15
0
30
1.41

Tables:   1

The End!