Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007902.1 Corchorus capsularis cultivar CVL-1 contig07923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23224

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4117--4197
31
2.5
32
82
8
101
24
11
22
41
1.86
4137--4199
31
2.0
31
93
0
108
22
11
15
50
1.75
5738--5775
15
2.5
15
100
0
76
15
55
0
28
1.41
7097--7136
18
2.2
18
86
0
53
47
20
25
7
1.75
7068--7167
47
2.1
48
81
5
114
48
20
26
6
1.72
7115--7197
30
2.8
29
80
3
103
48
21
25
4
1.70
8626--8685
32
1.9
31
90
6
95
31
18
13
36
1.89
12097--12145
16
3.3
16
75
18
61
16
2
22
59
1.47
12368--12404
19
1.9
19
94
0
65
32
16
13
37
1.87
13023--13079
29
2.0
29
92
0
96
43
17
3
35
1.66
13801--13935
69
1.9
70
92
3
227
32
14
5
46
1.69
15058--15085
6
4.7
6
100
0
56
32
0
0
67
0.91
17179--17530
170
2.1
170
93
0
596
33
11
20
34
1.88
21749--21796
25
2.0
25
88
12
73
43
0
0
56
0.99

Tables:   1

The End!