Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007903.1 Corchorus capsularis cultivar CVL-1 contig07924, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43683

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2066--2095
15
2.0
15
93
0
51
20
10
26
43
1.83
2998--3047
16
3.4
16
69
25
56
26
2
18
54
1.54
2995--3051
27
2.1
27
100
0
114
26
3
19
50
1.63
4356--4453
39
2.4
43
75
13
100
20
21
7
51
1.71
17018--18127
432
2.5
430
85
4
1444
42
12
14
30
1.83
19195--19222
13
2.2
13
100
0
56
35
0
35
28
1.58
19599--19661
30
2.1
31
85
11
87
61
7
3
26
1.39
21201--21249
17
2.9
17
87
0
80
20
32
16
30
1.94
22402--22637
105
2.3
104
89
0
355
30
18
17
33
1.94
41222--41248
5
5.4
5
100
0
54
22
18
0
59
1.38
41273--41341
35
2.0
35
94
0
120
42
18
5
33
1.75
41477--41542
29
2.2
32
78
15
86
39
3
0
57
1.14
41491--41551
30
2.1
30
93
3
106
44
3
0
52
1.17

Tables:   1

The End!