Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007915.1 Corchorus capsularis cultivar CVL-1 contig07936, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10977

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2862--2897
17
2.0
19
89
10
58
61
11
5
22
1.50
5072--5105
2
17.0
2
100
0
68
50
0
0
50
1.00
8252--8337
6
15.7
6
75
20
82
30
51
18
0
1.47
8261--8337
22
3.5
23
79
10
81
31
50
18
0
1.47
8252--8337
16
5.2
16
75
10
77
30
51
18
0
1.47
9092--9149
16
3.7
16
90
2
82
41
41
13
3
1.62
9140--9182
10
4.3
10
100
0
86
18
62
18
0
1.32

Tables:   1

The End!