Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007917.1 Corchorus capsularis cultivar CVL-1 contig07938, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17843

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5540--5586
17
2.6
19
83
16
64
78
0
12
8
0.95
5542--5595
17
3.1
18
80
15
60
79
0
14
5
0.90
5528--5595
35
1.9
36
81
3
84
76
0
17
5
0.98
5625--5684
25
2.4
25
91
2
93
36
8
15
40
1.77
6018--6060
20
2.2
20
83
8
52
72
0
18
9
1.11
13939--14045
33
3.2
33
92
5
180
46
17
7
28
1.75
13939--14076
66
2.1
66
83
2
170
44
18
7
29
1.78
14072--14168
33
2.9
33
87
0
140
44
19
10
25
1.82
17350--17390
2
20.5
2
94
0
73
46
0
0
53
1.00

Tables:   1

The End!