Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007921.1 Corchorus capsularis cultivar CVL-1 contig07942, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30036

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6805--6881
29
2.6
30
85
2
111
19
27
15
37
1.92
6915--6985
32
2.2
32
89
0
106
30
29
23
15
1.95
6917--6998
32
2.6
32
84
3
85
30
28
24
17
1.97
10685--10911
119
1.9
119
93
0
391
27
19
21
31
1.97
18570--18594
10
2.5
10
100
0
50
40
24
8
28
1.83
26802--26873
37
1.9
37
88
0
108
29
23
20
26
1.99
26961--27014
28
1.9
28
84
0
72
44
18
12
24
1.85
28662--28700
20
1.9
21
89
5
62
23
20
0
56
1.42

Tables:   1

The End!