Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007926.1 Corchorus capsularis cultivar CVL-1 contig07947, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32598

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4609--4634
2
13.0
2
100
0
52
50
0
0
50
1.00
9039--9301
107
2.5
105
86
2
368
42
8
7
41
1.64
10044--10120
32
2.4
32
88
0
109
25
2
27
44
1.67
10532--10586
16
3.4
16
73
9
58
9
7
21
61
1.50
13558--13596
14
2.8
14
84
0
51
48
25
7
17
1.74
14693--14744
27
1.9
27
88
0
77
61
7
9
21
1.51
17932--17978
2
23.0
2
91
4
76
46
2
2
48
1.25
19645--19679
3
11.7
3
100
0
70
34
31
0
34
1.58
21008--21094
45
1.9
45
100
0
174
34
22
2
40
1.67
28228--28261
9
3.8
9
88
0
50
73
11
0
14
1.10
28442--28471
16
1.9
15
93
6
51
40
6
0
53
1.27
30574--30610
19
1.9
19
94
0
65
56
2
0
40
1.13

Tables:   1

The End!