Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007932.1 Corchorus capsularis cultivar CVL-1 contig07953, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49225

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1241--1282
21
2.0
21
86
9
59
47
35
0
16
1.47
5760--5797
18
2.1
19
90
5
60
47
18
10
23
1.79
13477--13639
21
7.8
21
72
5
114
29
26
12
31
1.93
14124--14228
45
2.3
45
82
6
124
36
16
16
31
1.91
16092--16145
27
2.0
27
96
0
99
35
3
31
29
1.75
16131--16163
7
4.7
7
92
7
50
54
0
45
0
0.99
16499--16529
16
1.9
16
93
0
53
6
12
45
35
1.68
35405--35781
187
2.0
187
95
0
682
32
25
15
26
1.95
36858--36979
31
3.7
33
83
11
144
35
18
9
37
1.82
36889--36991
31
3.2
31
85
12
154
33
18
7
40
1.79
36858--36983
65
1.9
66
90
4
202
34
18
8
38
1.82
36858--37251
184
2.2
182
93
2
666
32
18
8
39
1.82
36994--37251
35
7.1
35
76
17
242
32
18
8
40
1.81
37077--37132
14
3.7
15
71
15
53
35
16
8
39
1.80
37108--37257
81
1.9
80
87
5
221
32
19
8
40
1.80

Tables:   1

The End!