Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007934.1 Corchorus capsularis cultivar CVL-1 contig07955, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24764

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1779--1805
13
2.1
13
100
0
54
7
0
29
62
1.22
2611--2639
6
4.8
6
100
0
58
17
65
0
17
1.27
3359--3455
51
1.9
51
95
0
176
37
20
8
34
1.83
5233--5334
31
3.4
30
80
13
95
22
17
22
37
1.94
9768--9802
16
2.2
16
94
0
61
14
0
54
31
1.40
10778--10909
70
1.9
67
92
4
219
23
7
31
37
1.83
11788--11824
5
7.8
5
85
8
51
0
2
16
81
0.81
11788--11820
15
2.3
14
94
5
57
0
3
18
78
0.87
20208--20249
21
2.0
21
95
0
75
19
21
4
54
1.62
22069--22128
30
2.1
30
84
6
79
16
15
6
61
1.53
22899--22973
32
2.3
33
84
8
93
14
42
33
9
1.78
22954--23047
33
2.8
33
84
6
111
11
29
41
17
1.84
23221--23298
32
2.5
31
87
8
106
50
11
7
30
1.67

Tables:   1

The End!