Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007937.1 Corchorus capsularis cultivar CVL-1 contig07958, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46630

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2231--2279
21
2.3
23
79
13
59
38
20
4
36
1.72
13803--13833
2
15.5
2
100
0
62
51
0
0
48
1.00
15323--15370
2
23.5
2
85
4
60
43
0
6
50
1.27
32565--32602
2
19.0
2
100
0
76
50
0
0
50
1.00
37734--37765
6
5.3
6
100
0
64
34
0
15
50
1.45
41621--41662
1
42.0
1
100
0
84
0
0
0
100
0.00
44870--46630
332
5.3
332
90
2
2704
32
16
17
33
1.92
44870--46630
666
2.7
664
90
3
2780
32
16
17
33
1.92

Tables:   1

The End!