Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007939.1 Corchorus capsularis cultivar CVL-1 contig07960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37573

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1602--1664
32
2.0
31
81
12
74
9
6
6
77
1.11
2721--2864
46
3.1
46
95
0
261
27
26
4
40
1.76
13267--13371
34
3.2
34
93
4
180
25
22
27
23
2.00
28168--28213
13
3.5
13
91
8
67
84
8
4
2
0.83
28171--28259
12
7.2
12
88
6
70
78
17
2
1
0.91
28193--28259
8
8.6
8
86
6
93
76
20
1
1
0.95
28207--28259
4
13.2
4
95
0
97
73
24
1
0
0.93
29374--29457
43
2.0
43
90
4
134
39
10
17
32
1.84

Tables:   1

The End!