Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007943.1 Corchorus capsularis cultivar CVL-1 contig07964, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15953

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1705--1779
27
2.8
27
91
0
132
38
12
26
22
1.89
4451--4479
15
1.9
15
100
0
58
20
3
27
48
1.66
14848--14923
16
4.9
15
73
15
57
40
35
17
6
1.75
15282--15338
6
8.7
7
88
11
54
84
14
1
0
0.71
15281--15325
6
7.7
6
92
5
74
86
13
0
0
0.57
15739--15826
33
2.7
33
84
7
115
18
39
30
11
1.86

Tables:   1

The End!