Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007944.1 Corchorus capsularis cultivar CVL-1 contig07965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17383

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--87
33
2.5
33
83
4
92
16
30
36
17
1.92
4673--4730
28
2.1
28
100
0
116
6
39
20
32
1.79
15816--15987
31
5.5
31
85
2
168
17
22
25
34
1.96
15816--15984
62
2.7
61
79
7
196
17
22
25
34
1.96
17160--17197
19
2.0
20
94
5
69
31
10
7
50
1.66

Tables:   1

The End!