Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007948.1 Corchorus capsularis cultivar CVL-1 contig07969, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4655

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
222--307
45
1.9
45
87
0
127
56
15
4
23
1.57
650--678
1
29.0
1
100
0
58
100
0
0
0
0.00
1717--1781
32
2.0
32
93
0
112
52
16
4
26
1.63
3832--3877
19
2.2
21
85
11
60
28
15
4
52
1.61
3818--3892
22
3.5
22
76
10
66
30
14
9
45
1.77
3990--4030
21
1.9
22
85
5
57
24
19
9
46
1.80
3850--4104
22
12.0
21
66
18
109
34
16
9
39
1.81

Tables:   1

The End!