Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007951.1 Corchorus capsularis cultivar CVL-1 contig07972, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6551

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2537--2573
19
2.0
19
94
5
67
29
5
5
59
1.42
2552--2582
16
1.9
16
93
0
53
38
9
3
48
1.52
3220--3262
16
2.6
17
85
3
61
74
0
16
9
1.06
3227--3262
17
2.1
17
89
0
54
77
0
13
8
0.98
3220--3262
15
2.9
14
78
21
52
74
0
16
9
1.06
4271--4388
45
2.6
44
82
11
125
27
21
2
49
1.62
4327--4416
24
3.8
24
81
5
96
25
24
2
47
1.63
4217--4412
8
24.0
8
66
16
82
26
23
3
46
1.66
4390--4528
58
2.4
58
84
3
154
22
23
11
42
1.86
4507--4562
21
2.6
21
88
5
76
30
17
5
46
1.71
4527--4575
14
3.4
14
83
11
55
28
16
4
51
1.63
4579--4615
16
2.3
16
90
0
56
29
24
2
43
1.68
4676--4724
22
2.2
22
85
7
64
30
30
2
36
1.69
4668--4760
36
2.6
36
87
0
132
29
26
5
38
1.78
4724--4808
22
3.7
22
76
13
73
27
22
7
43
1.79
5074--5123
22
2.3
22
85
0
64
26
22
8
44
1.80

Tables:   1

The End!