Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007953.1 Corchorus capsularis cultivar CVL-1 contig07974, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55623

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3040--3088
21
2.3
21
85
0
62
10
28
28
32
1.90
3949--3978
1
30.0
1
100
0
60
100
0
0
0
0.00
14190--14214
12
2.1
12
100
0
50
24
32
20
24
1.98
15565--15657
44
2.1
44
80
4
98
32
7
11
48
1.68
18135--18164
14
2.1
14
93
0
51
10
6
23
60
1.52
20244--20286
19
2.2
20
84
12
54
39
6
0
53
1.28
38777--38810
16
2.2
16
89
5
52
58
8
2
29
1.43
40095--40130
19
1.9
18
88
5
54
33
22
2
41
1.68
45458--45937
57
8.9
54
76
12
373
47
6
17
27
1.72
45458--45882
109
3.9
107
84
8
461
47
6
18
27
1.73
45499--45932
164
2.6
161
81
7
446
48
6
17
28
1.71
45455--45938
53
9.0
53
76
10
322
47
6
17
27
1.73
51496--51527
2
16.0
2
93
0
55
50
3
0
46
1.17

Tables:   1

The End!