Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007960.1 Corchorus capsularis cultivar CVL-1 contig07981, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21537

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1207--1245
16
2.4
16
82
0
51
5
17
0
76
0.96
5348--5386
21
1.9
20
84
5
51
46
12
20
20
1.83
8147--8193
2
24.0
2
83
12
62
51
2
0
46
1.13
9785--9832
17
3.0
17
73
14
57
29
2
10
58
1.43
10130--10168
3
13.0
3
94
0
69
30
0
2
66
1.05
17075--17135
30
2.0
30
93
0
104
8
27
37
26
1.85

Tables:   1

The End!