Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007962.1 Corchorus capsularis cultivar CVL-1 contig07983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27730

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11178--11218
21
2.0
21
90
0
64
17
12
36
34
1.87
11367--11399
17
1.9
17
100
0
66
27
6
36
30
1.81
11751--12113
155
2.3
154
78
7
360
35
18
14
31
1.90
13709--13787
41
1.9
41
87
5
115
41
18
12
26
1.87
14185--14291
52
2.1
52
94
0
187
52
12
2
32
1.53
16250--16277
10
2.8
10
100
0
56
50
0
17
32
1.47
24508--24563
25
2.2
25
83
0
76
64
3
5
26
1.32
25270--25332
33
1.9
33
90
6
101
34
14
9
41
1.78
25359--25758
36
10.2
36
75
19
322
35
16
10
38
1.82
25385--25797
44
10.1
44
74
16
406
36
15
9
38
1.81
25217--25790
80
7.1
80
87
6
755
35
16
9
38
1.81

Tables:   1

The End!