Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007963.1 Corchorus capsularis cultivar CVL-1 contig07984, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14490

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
255--319
17
4.2
16
81
16
68
30
7
3
58
1.42
369--483
12
10.1
11
71
12
65
30
6
1
61
1.30
407--485
4
19.5
4
71
7
52
25
6
1
67
1.22
373--483
24
4.8
23
76
10
84
29
6
1
62
1.30
443--496
25
2.1
27
82
6
67
29
5
0
64
1.16
909--996
21
3.9
21
76
18
88
3
1
11
84
0.81
910--996
30
2.9
30
81
11
97
3
1
11
83
0.81
910--996
31
2.9
31
83
8
99
3
1
11
83
0.81
909--979
1
71.0
1
74
0
61
0
1
11
87
0.61
1038--1076
10
3.9
10
83
10
53
28
0
10
61
1.28
4709--4749
21
2.0
21
90
0
64
43
9
36
9
1.71
13750--13800
12
4.5
11
85
9
59
82
3
13
0
0.81
13750--13800
24
2.2
23
89
10
77
82
3
13
0
0.81

Tables:   1

The End!