Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007970.1 Corchorus capsularis cultivar CVL-1 contig07991, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4602

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42--215
22
7.8
22
71
14
115
37
9
13
39
1.76
43--170
44
2.9
44
78
11
145
39
10
13
37
1.78
178--225
22
2.2
22
88
7
71
27
4
20
47
1.68
329--384
22
2.6
23
80
11
73
41
5
16
37
1.71
670--798
22
5.9
22
69
17
88
38
10
13
37
1.78
671--798
44
2.9
44
78
11
145
39
10
13
37
1.78
672--819
44
3.3
46
77
9
128
39
10
12
37
1.76
669--853
22
8.3
22
71
7
86
36
8
16
38
1.79
889--1306
22
18.9
22
68
11
122
40
10
15
34
1.80
1114--1304
88
2.2
87
78
6
197
43
8
12
35
1.74
1550--1656
23
4.7
23
79
6
94
38
10
14
36
1.81
1385--1675
22
13.6
21
72
13
175
41
10
13
35
1.78
1640--1686
22
2.1
22
84
0
58
36
10
10
42
1.74
1738--1825
22
4.0
22
71
11
72
31
13
17
37
1.88
2039--2068
2
15.0
2
100
0
60
50
0
0
50
1.00
3927--3978
27
1.9
27
84
0
68
32
34
1
30
1.69

Tables:   1

The End!