Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007979.1 Corchorus capsularis cultivar CVL-1 contig08000, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13380

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
888--944
16
3.6
16
78
4
62
8
14
38
38
1.77
3239--3290
27
2.0
27
88
3
79
32
11
21
34
1.89
5180--5210
2
15.5
2
100
0
62
48
0
0
51
1.00
6534--6560
2
13.5
2
100
0
54
48
0
0
51
1.00
11588--11634
15
2.8
17
84
12
53
65
2
31
0
1.04
11599--11634
15
2.4
14
90
9
54
69
2
27
0
1.02

Tables:   1

The End!