Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007988.1 Corchorus capsularis cultivar CVL-1 contig08009, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23089

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1417--1507
42
2.2
42
95
0
164
14
52
23
9
1.71
1678--1734
23
2.5
23
94
0
96
10
49
26
14
1.75
4904--4938
13
2.7
13
95
0
61
20
11
8
60
1.57
4932--4990
28
2.3
24
82
11
64
18
6
15
59
1.58
14482--14511
9
3.2
9
95
4
51
40
10
3
46
1.54
14928--14982
22
2.6
21
88
2
83
9
16
49
25
1.75
17450--17504
23
2.4
23
90
0
74
40
14
7
38
1.74
17457--17504
23
2.1
23
96
0
87
39
10
8
41
1.69

Tables:   1

The End!